https://ogma.newcastle.edu.au/vital/access/ /manager/Index ${session.getAttribute("locale")} 5 The subclonal architecture of metastatic breast cancer: results from a prospective community-based rapid autopsy program "CASCADE" https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:29735 Wed 11 Apr 2018 14:45:58 AEST ]]> Cryobiopsy for Identification of Usual Interstitial Pneumonia and Other Interstitial Lung Disease Features: Further Lessons from COLDICE, a Prospective Multicenter Clinical Trial https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:41876 Tue 16 Aug 2022 14:17:45 AEST ]]> Transrectal ultrasound-guided prostate needle biopsy remains a safe method in confirming a prostate cancer diagnosis: a multicentre Australian analysis of infection rates https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:46010 Tue 08 Nov 2022 17:28:03 AEDT ]]> Oesophageal eosinophilic infiltration in patients with noncardiac chest pain https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:12216 Sat 24 Mar 2018 08:12:07 AEDT ]]> Gleason scoring: a comparison of classical and modified (International Society of Urological Pathology) criteria using nadir PSA as a clinical end point https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:10469 Sat 24 Mar 2018 08:09:12 AEDT ]]> Clinical value of duodenal biopsies: beyond the diagnosis of coeliac disease https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:17888 Sat 24 Mar 2018 07:56:24 AEDT ]]> Stable post-TRUS biopsy sepsis rates and antibiotic resistance over 5 years in patients from Newcastle, New South Wales https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:23078 Sat 24 Mar 2018 07:12:35 AEDT ]]> Gastric microbiota in a low-helicobacter pylori prevalence general population and their associations with gastric lesions https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:39981 Helicobacter pylori microbiota might account for some cases with unexplained chronic gastritis that may in a minority eventually progress to gastric cancer through the Correa cascade. We characterized gastric microbiota by describing the normal stomach, compared it with early precancerous lesions and other disease states, and assessed whether H. pylori status affects bacterial diversity. Methods: In a population-based study of those with and without gastrointestinal symptoms, cytology brush samples were collected during endoscopy from 316 individuals. Mucosal status was classified as normal mucosa (171), nonatrophic H. pylori gastritis (33), atrophic gastritis (12), or antral chemical gastritis (61). The 16S rRNA gene sequencing and analysis were performed to characterize the microbiota. Results: Microbiota in atrophic gastritis and nonatrophic H. pylori gastritis stomachs were dysbiotic and differed from those in the normal stomach (P = 0.001). The normal stomach had the highest microbial diversity, followed by antral chemical gastritis. The atrophic gastritis and chronic H. pylori gastritis groups had the lowest diversity, a difference that was statistically significant (P = 0.01). Besides H. pylori, non–H. pylori bacteria accounted for group differences. Microbial network analysis showed that the normal group network was most highly connected, whereas the H. pylori gastritis group had the lowest connection. We found an increasing positive co-occurrence of oral bacteria in the stomach because samples deviated from the normal network, some of which were pathogens. The H. pylori–negative group had the highest microbial diversity (Shannon index) compared with the H. pylori–positive group (P = 0.001). Discussion: In this low–H. pylori prevalence general population, the gastric mucosal microbiota of the normal stomach differed significantly from those with nonatrophic or atrophic gastritis. There was an increasing abundance of pathogenic bacteria from the normal state to early precancerous states.]]> Fri 15 Jul 2022 10:16:11 AEST ]]>